Coverage report: 73%

Files Functions Classes

coverage.py v7.6.0, created at 2024-07-12 22:34 +0200

File function statements missing excluded coverage
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src/bob/bio/base/pipelines/score_post_processor.py TNormScores.fit 8 3 0 62%
src/bob/bio/base/pipelines/score_post_processor.py TNormScores.transform 10 2 0 80%
src/bob/bio/base/pipelines/score_post_processor.py TNormScores.transform._transform_samples 6 0 0 100%
src/bob/bio/base/pipelines/score_post_processor.py LLRCalibration.fit 3 3 0 0%
src/bob/bio/base/pipelines/score_post_processor.py LLRCalibration.predict_proba 2 2 0 0%
src/bob/bio/base/pipelines/score_post_processor.py LLRCalibration.predict_proba.get_sigmoid_score 1 1 0 0%
src/bob/bio/base/pipelines/score_post_processor.py WeibullCalibration.fit 14 14 0 0%
src/bob/bio/base/pipelines/score_post_processor.py WeibullCalibration.fit.weibull_pdf_genuines 1 1 0 0%
src/bob/bio/base/pipelines/score_post_processor.py WeibullCalibration.fit.weibull_pdf_impostors 1 1 0 0%
src/bob/bio/base/pipelines/score_post_processor.py WeibullCalibration.predict_proba 2 2 0 0%
src/bob/bio/base/pipelines/score_post_processor.py GammaCalibration.fit 14 14 0 0%
src/bob/bio/base/pipelines/score_post_processor.py GammaCalibration.fit.gamma_pdf_genuines 1 1 0 0%
src/bob/bio/base/pipelines/score_post_processor.py GammaCalibration.fit.gamma_pdf_impostors 1 1 0 0%
src/bob/bio/base/pipelines/score_post_processor.py GammaCalibration.predict_proba 2 2 0 0%
src/bob/bio/base/pipelines/score_post_processor.py BetaCalibration.fit 13 13 0 0%
src/bob/bio/base/pipelines/score_post_processor.py BetaCalibration.fit.beta_pdf 1 1 0 0%
src/bob/bio/base/pipelines/score_post_processor.py BetaCalibration.predict_proba 2 2 0 0%
src/bob/bio/base/pipelines/score_post_processor.py CategoricalCalibration.__init__ 8 8 0 0%
src/bob/bio/base/pipelines/score_post_processor.py CategoricalCalibration.fit 15 15 0 0%
src/bob/bio/base/pipelines/score_post_processor.py CategoricalCalibration.fit.impostor_threshold 12 12 0 0%
src/bob/bio/base/pipelines/score_post_processor.py CategoricalCalibration.fit.genuine_threshold 12 12 0 0%
src/bob/bio/base/pipelines/score_post_processor.py CategoricalCalibration.fit.get_sigmoid_score 1 1 0 0%
src/bob/bio/base/pipelines/score_post_processor.py CategoricalCalibration.transform 12 12 0 0%
src/bob/bio/base/pipelines/score_post_processor.py (no function) 61 0 0 100%
src/bob/bio/base/pipelines/score_writers.py FourColumnsScoreWriter.__init__ 1 0 0 100%
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src/bob/bio/base/pipelines/score_writers.py FourColumnsScoreWriter.write._write 11 1 0 91%
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src/bob/bio/base/pipelines/wrappers.py BioAlgorithmBaseWrapper.compare 1 0 0 100%
src/bob/bio/base/pipelines/wrappers.py BioAlgCheckpointWrapper.__init__ 11 0 0 100%
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src/bob/bio/base/pipelines/wrappers.py BioAlgCheckpointWrapper._enroll_sample_set 9 0 0 100%
src/bob/bio/base/pipelines/wrappers.py BioAlgCheckpointWrapper.create_templates_from_samplesets 8 0 0 100%
src/bob/bio/base/pipelines/wrappers.py BioAlgDaskWrapper.__init__ 1 0 0 100%
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src/bob/bio/base/pipelines/wrappers.py BioAlgDaskWrapper.score_sample_templates 6 0 0 100%
src/bob/bio/base/pipelines/wrappers.py _delayed_samples_to_samples 1 0 0 100%
src/bob/bio/base/pipelines/wrappers.py dask_bio_pipeline 12 1 0 92%
src/bob/bio/base/pipelines/wrappers.py dask_bio_pipeline._write_scores 1 0 0 100%
src/bob/bio/base/pipelines/wrappers.py checkpoint_pipeline_simple 9 2 0 78%
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src/bob/bio/base/pipelines/wrappers.py (no function) 34 0 0 100%
src/bob/bio/base/preprocessor/Preprocessor.py Preprocessor.__init__ 7 0 0 100%
src/bob/bio/base/preprocessor/Preprocessor.py Preprocessor.__call__ 1 1 0 0%
src/bob/bio/base/preprocessor/Preprocessor.py Preprocessor.__str__ 1 1 0 0%
src/bob/bio/base/preprocessor/Preprocessor.py Preprocessor.write_data 1 0 0 100%
src/bob/bio/base/preprocessor/Preprocessor.py Preprocessor.read_data 1 0 0 100%
src/bob/bio/base/preprocessor/Preprocessor.py (no function) 8 0 0 100%
src/bob/bio/base/preprocessor/__init__.py __appropriate__ 2 0 0 100%
src/bob/bio/base/preprocessor/__init__.py (no function) 4 0 0 100%
src/bob/bio/base/score/__init__.py (no function) 1 0 0 100%
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src/bob/bio/base/score/load.py open_file 13 3 0 77%
src/bob/bio/base/score/load.py four_column 1 0 0 100%
src/bob/bio/base/score/load.py split_four_column 2 0 0 100%
src/bob/bio/base/score/load.py get_split_dataframe 4 4 0 0%
src/bob/bio/base/score/load.py split_csv_scores 4 4 0 0%
src/bob/bio/base/score/load.py cmc_four_column 2 0 0 100%
src/bob/bio/base/score/load.py five_column 1 0 0 100%
src/bob/bio/base/score/load.py split_five_column 2 0 0 100%
src/bob/bio/base/score/load.py cmc_five_column 2 0 0 100%
src/bob/bio/base/score/load.py scores 1 0 0 100%
src/bob/bio/base/score/load.py split 11 3 0 73%
src/bob/bio/base/score/load.py cmc 5 0 0 100%
src/bob/bio/base/score/load.py load_score 21 1 0 95%
src/bob/bio/base/score/load.py load_score.convertfunc 1 0 0 100%
src/bob/bio/base/score/load.py load_files 6 6 0 0%
src/bob/bio/base/score/load.py get_negatives_positives 4 4 0 0%
src/bob/bio/base/score/load.py get_negatives_positives_from_file 2 2 0 0%
src/bob/bio/base/score/load.py get_negatives_positives_all 8 8 0 0%
src/bob/bio/base/score/load.py get_all_scores 1 1 0 0%
src/bob/bio/base/score/load.py dump_score 6 1 0 83%
src/bob/bio/base/score/load.py _estimate_score_file_format 11 3 0 73%
src/bob/bio/base/score/load.py _iterate_score_file 11 2 0 82%
src/bob/bio/base/score/load.py _iterate_csv_score_file 5 0 0 100%
src/bob/bio/base/score/load.py _split_scores 5 0 0 100%
src/bob/bio/base/score/load.py _split_cmc_scores 12 0 0 100%
src/bob/bio/base/score/load.py split_csv_vuln 12 0 0 100%
src/bob/bio/base/score/load.py (no function) 35 0 0 100%
src/bob/bio/base/script/__init__.py (no function) 0 0 0 100%
src/bob/bio/base/script/annotate.py save_json 2 0 0 100%
src/bob/bio/base/script/annotate.py load_json 2 0 0 100%
src/bob/bio/base/script/annotate.py annotate_common_options 2 0 0 100%
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src/bob/bio/base/script/annotate.py annotate 15 1 0 93%
src/bob/bio/base/script/annotate.py annotate_samples 14 1 0 93%
src/bob/bio/base/script/annotate.py (no function) 27 0 0 100%
src/bob/bio/base/script/bio.py bio 1 1 0 0%
src/bob/bio/base/script/bio.py (no function) 7 7 0 0%
src/bob/bio/base/script/commands.py rank_option 2 0 0 100%
src/bob/bio/base/script/commands.py rank_option.custom_rank_option 2 0 0 100%
src/bob/bio/base/script/commands.py rank_option.custom_rank_option.callback 3 0 0 100%
src/bob/bio/base/script/commands.py metrics 4 0 0 100%
src/bob/bio/base/script/commands.py roc 2 2 0 0%
src/bob/bio/base/script/commands.py det 2 0 0 100%
src/bob/bio/base/script/commands.py epc 2 0 0 100%
src/bob/bio/base/script/commands.py hist 2 0 0 100%
src/bob/bio/base/script/commands.py evaluate 3 3 0 0%
src/bob/bio/base/script/commands.py multi_metrics 3 3 0 0%
src/bob/bio/base/script/commands.py cmc 2 0 0 100%
src/bob/bio/base/script/commands.py dir 2 0 0 100%
src/bob/bio/base/script/commands.py (no function) 71 0 0 100%
src/bob/bio/base/script/compare_samples.py compare_samples 17 4 0 76%
src/bob/bio/base/script/compare_samples.py (no function) 18 0 0 100%
src/bob/bio/base/script/error_utils.py calc_pass_rate 1 0 0 100%
src/bob/bio/base/script/error_utils.py weighted_neg_error_rate_criteria 17 3 0 82%
src/bob/bio/base/script/error_utils.py epsc_weights 3 3 0 0%
src/bob/bio/base/script/error_utils.py recursive_thr_search 10 0 0 100%
src/bob/bio/base/script/error_utils.py weighted_negatives_threshold 4 0 0 100%
src/bob/bio/base/script/error_utils.py epsc_thresholds 15 4 0 73%
src/bob/bio/base/script/error_utils.py weighted_err 1 0 0 100%
src/bob/bio/base/script/error_utils.py error_rates_at_weight 9 0 0 100%
src/bob/bio/base/script/error_utils.py epsc_error_rates 7 7 0 0%
src/bob/bio/base/script/error_utils.py all_error_rates 15 0 0 100%
src/bob/bio/base/script/error_utils.py calc_aue 13 13 0 0%
src/bob/bio/base/script/error_utils.py (no function) 13 0 0 100%
src/bob/bio/base/script/figure.py Roc.__init__ 4 4 0 0%
src/bob/bio/base/script/figure.py Det.__init__ 3 0 0 100%
src/bob/bio/base/script/figure.py Cmc.__init__ 6 0 0 100%
src/bob/bio/base/script/figure.py Cmc.compute 16 0 0 100%
src/bob/bio/base/script/figure.py Dir.__init__ 6 0 0 100%
src/bob/bio/base/script/figure.py Dir.compute 15 0 0 100%
src/bob/bio/base/script/figure.py Metrics.__init__ 1 0 0 100%
src/bob/bio/base/script/figure.py Metrics.init_process 2 0 0 100%
src/bob/bio/base/script/figure.py Metrics.compute 61 13 0 79%
src/bob/bio/base/script/figure.py MultiMetrics.__init__ 1 1 0 0%
src/bob/bio/base/script/figure.py Hist._setup_hist 3 0 0 100%
src/bob/bio/base/script/figure.py (no function) 27 0 0 100%
src/bob/bio/base/script/gen.py gen_score_distr 6 0 0 100%
src/bob/bio/base/script/gen.py write_scores_to_file 38 3 0 92%
src/bob/bio/base/script/gen.py gen 16 3 0 81%
src/bob/bio/base/script/gen.py (no function) 26 0 0 100%
src/bob/bio/base/script/pipeline.py pipeline 1 1 0 0%
src/bob/bio/base/script/pipeline.py (no function) 7 7 0 0%
src/bob/bio/base/script/pipeline_score_norm.py pipeline_score_norm 7 0 0 100%
src/bob/bio/base/script/pipeline_score_norm.py (no function) 25 0 0 100%
src/bob/bio/base/script/pipeline_simple.py pipeline_simple 11 0 0 100%
src/bob/bio/base/script/pipeline_simple.py (no function) 22 0 0 100%
src/bob/bio/base/script/pipeline_train.py pipeline_train 9 0 0 100%
src/bob/bio/base/script/pipeline_train.py (no function) 22 0 0 100%
src/bob/bio/base/script/pipeline_transform.py pipeline_transform 16 16 0 0%
src/bob/bio/base/script/pipeline_transform.py (no function) 17 17 0 0%
src/bob/bio/base/script/resources.py resources 19 19 0 0%
src/bob/bio/base/script/resources.py databases 12 12 0 0%
src/bob/bio/base/script/resources.py (no function) 11 11 0 0%
src/bob/bio/base/script/sort.py sort 6 0 0 100%
src/bob/bio/base/script/sort.py (no function) 10 0 0 100%
src/bob/bio/base/script/vuln_commands.py vuln_plot_options 2 0 0 100%
src/bob/bio/base/script/vuln_commands.py vuln_plot_options.custom_options_command 26 0 0 100%
src/bob/bio/base/script/vuln_commands.py vuln_plot_options.custom_options_command.eval_if_not_forced 2 0 0 100%
src/bob/bio/base/script/vuln_commands.py vuln_plot_options.custom_options_command.eval_if_not_forced.decorator 3 0 0 100%
src/bob/bio/base/script/vuln_commands.py vuln_plot_options.custom_options_command.wrapper 1 0 0 100%
src/bob/bio/base/script/vuln_commands.py real_data_option 1 0 0 100%
src/bob/bio/base/script/vuln_commands.py fnmr_at_option 1 0 0 100%
src/bob/bio/base/script/vuln_commands.py gen_score_distr 5 5 0 0%
src/bob/bio/base/script/vuln_commands.py write_scores_to_file 11 11 0 0%
src/bob/bio/base/script/vuln_commands.py gen 4 4 0 0%
src/bob/bio/base/script/vuln_commands.py metrics 2 0 0 100%
src/bob/bio/base/script/vuln_commands.py roc 2 0 0 100%
src/bob/bio/base/script/vuln_commands.py det 2 0 0 100%
src/bob/bio/base/script/vuln_commands.py epc 2 0 0 100%
src/bob/bio/base/script/vuln_commands.py epsc 8 0 0 100%
src/bob/bio/base/script/vuln_commands.py hist 2 0 0 100%
src/bob/bio/base/script/vuln_commands.py fmr_iapmr 2 0 0 100%
src/bob/bio/base/script/vuln_commands.py evaluate 26 2 0 92%
src/bob/bio/base/script/vuln_commands.py (no function) 71 0 0 100%
src/bob/bio/base/script/vuln_figure.py clean_scores 4 0 0 100%
src/bob/bio/base/script/vuln_figure.py Metrics.__init__ 1 0 0 100%
src/bob/bio/base/script/vuln_figure.py Metrics._get_all_metrics 24 2 0 92%
src/bob/bio/base/script/vuln_figure.py Metrics._numbers 16 0 0 100%
src/bob/bio/base/script/vuln_figure.py Metrics._strings 1 0 0 100%
src/bob/bio/base/script/vuln_figure.py Metrics.compute 16 1 0 94%
src/bob/bio/base/script/vuln_figure.py _iapmr_dot 5 1 0 80%
src/bob/bio/base/script/vuln_figure.py _iapmr_line_plot 7 0 0 100%
src/bob/bio/base/script/vuln_figure.py _iapmr_plot 2 0 0 100%
src/bob/bio/base/script/vuln_figure.py HistVuln.__init__ 1 0 0 100%
src/bob/bio/base/script/vuln_figure.py HistVuln._setup_hist 4 0 0 100%
src/bob/bio/base/script/vuln_figure.py HistVuln._get_neg_pos_thres 6 0 0 100%
src/bob/bio/base/script/vuln_figure.py HistVuln._lines 18 0 0 100%
src/bob/bio/base/script/vuln_figure.py Epc.__init__ 10 1 0 90%
src/bob/bio/base/script/vuln_figure.py Epc.compute 32 1 0 97%
src/bob/bio/base/script/vuln_figure.py Epsc.__init__ 20 1 0 95%
src/bob/bio/base/script/vuln_figure.py Epsc.compute 62 12 0 81%
src/bob/bio/base/script/vuln_figure.py Epsc.end_process 8 0 0 100%
src/bob/bio/base/script/vuln_figure.py Epsc3D.__init__ 3 1 0 67%
src/bob/bio/base/script/vuln_figure.py Epsc3D.compute 24 1 0 96%
src/bob/bio/base/script/vuln_figure.py BaseVulnDetRoc.__init__ 7 0 0 100%
src/bob/bio/base/script/vuln_figure.py BaseVulnDetRoc.compute 32 3 0 91%
src/bob/bio/base/script/vuln_figure.py BaseVulnDetRoc._get_farfrr 1 1 0 0%
src/bob/bio/base/script/vuln_figure.py BaseVulnDetRoc._plot 1 1 0 0%
src/bob/bio/base/script/vuln_figure.py BaseVulnDetRoc._draw_fnmrs 1 1 0 0%
src/bob/bio/base/script/vuln_figure.py DetVuln.__init__ 17 0 0 100%
src/bob/bio/base/script/vuln_figure.py DetVuln._set_axis 3 0 0 100%
src/bob/bio/base/script/vuln_figure.py DetVuln._get_farfrr 2 0 0 100%
src/bob/bio/base/script/vuln_figure.py DetVuln._plot 13 0 0 100%
src/bob/bio/base/script/vuln_figure.py DetVuln._draw_fnmrs 24 6 0 75%
src/bob/bio/base/script/vuln_figure.py RocVuln.__init__ 18 2 0 89%
src/bob/bio/base/script/vuln_figure.py RocVuln._plot 13 0 0 100%
src/bob/bio/base/script/vuln_figure.py RocVuln._get_farfrr 3 0 0 100%
src/bob/bio/base/script/vuln_figure.py RocVuln._draw_fnmrs 18 4 0 78%
src/bob/bio/base/script/vuln_figure.py FmrIapmr.__init__ 13 1 0 92%
src/bob/bio/base/script/vuln_figure.py FmrIapmr.compute 14 0 0 100%
src/bob/bio/base/script/vuln_figure.py (no function) 55 0 0 100%
src/bob/bio/base/script/vulnerability.py vulnerability 1 1 0 0%
src/bob/bio/base/script/vulnerability.py (no function) 7 7 0 0%
src/bob/bio/base/transformers/__init__.py split_X_by_y 5 5 0 0%
src/bob/bio/base/transformers/__init__.py __appropriate__ 2 0 0 100%
src/bob/bio/base/transformers/__init__.py (no function) 8 0 0 100%
src/bob/bio/base/transformers/extractor.py ExtractorTransformer.__init__ 7 2 0 71%
src/bob/bio/base/transformers/extractor.py ExtractorTransformer.fit 7 2 0 71%
src/bob/bio/base/transformers/extractor.py ExtractorTransformer.transform 3 1 0 67%
src/bob/bio/base/transformers/extractor.py ExtractorTransformer._more_tags 1 0 0 100%
src/bob/bio/base/transformers/extractor.py (no function) 8 0 0 100%
src/bob/bio/base/transformers/preprocessing.py ReferenceIdEncoder.__init__ 1 1 0 0%
src/bob/bio/base/transformers/preprocessing.py ReferenceIdEncoder.fit 2 2 0 0%
src/bob/bio/base/transformers/preprocessing.py ReferenceIdEncoder.transform 2 2 0 0%
src/bob/bio/base/transformers/preprocessing.py ReferenceIdEncoder._more_tags 1 1 0 0%
src/bob/bio/base/transformers/preprocessing.py (no function) 7 0 0 100%
src/bob/bio/base/transformers/preprocessor.py PreprocessorTransformer.__init__ 4 1 0 75%
src/bob/bio/base/transformers/preprocessor.py PreprocessorTransformer.transform 3 1 0 67%
src/bob/bio/base/transformers/preprocessor.py PreprocessorTransformer._more_tags 1 0 0 100%
src/bob/bio/base/transformers/preprocessor.py PreprocessorTransformer.fit 1 1 0 0%
src/bob/bio/base/transformers/preprocessor.py (no function) 7 0 0 100%
src/bob/bio/base/utils/__init__.py score_fusion_strategy 4 4 0 0%
src/bob/bio/base/utils/__init__.py selected_indices 4 0 0 100%
src/bob/bio/base/utils/__init__.py selected_elements 4 0 0 100%
src/bob/bio/base/utils/__init__.py pretty_print 1 1 0 0%
src/bob/bio/base/utils/__init__.py is_argument_available 1 0 0 100%
src/bob/bio/base/utils/__init__.py (no function) 9 0 0 100%
src/bob/bio/base/utils/annotations.py read_annotation_file 44 30 0 32%
src/bob/bio/base/utils/annotations.py (no function) 8 0 0 100%
src/bob/bio/base/utils/io.py filter_missing_files 7 7 0 0%
src/bob/bio/base/utils/io.py filter_none 5 5 0 0%
src/bob/bio/base/utils/io.py check_file 7 7 0 0%
src/bob/bio/base/utils/io.py read_original_data 1 1 0 0%
src/bob/bio/base/utils/io.py load 3 1 0 67%
src/bob/bio/base/utils/io.py save 4 1 0 75%
src/bob/bio/base/utils/io.py open_compressed 10 10 0 0%
src/bob/bio/base/utils/io.py close_compressed 13 13 0 0%
src/bob/bio/base/utils/io.py load_compressed 4 4 0 0%
src/bob/bio/base/utils/io.py save_compressed 3 3 0 0%
src/bob/bio/base/utils/io.py (no function) 18 0 0 100%
src/bob/bio/base/utils/resources.py _collect_config 1 1 0 0%
src/bob/bio/base/utils/resources.py read_config_file 8 8 0 0%
src/bob/bio/base/utils/resources.py _get_entry_points 3 0 0 100%
src/bob/bio/base/utils/resources.py load_resource 32 26 0 19%
src/bob/bio/base/utils/resources.py extensions 2 0 0 100%
src/bob/bio/base/utils/resources.py resource_keys 6 6 0 0%
src/bob/bio/base/utils/resources.py list_resources 20 20 0 0%
src/bob/bio/base/utils/resources.py database_directories 14 14 0 0%
src/bob/bio/base/utils/resources.py get_resource_filename 10 10 0 0%
src/bob/bio/base/utils/resources.py (no function) 18 0 0 100%
src/bob/bio/base/wrappers.py wrap_bob_legacy 8 2 0 75%
src/bob/bio/base/wrappers.py wrap_sample_preprocessor 2 2 0 0%
src/bob/bio/base/wrappers.py wrap_checkpoint_preprocessor 2 0 0 100%
src/bob/bio/base/wrappers.py _prepare_extractor_sample_args 5 2 0 60%
src/bob/bio/base/wrappers.py wrap_sample_extractor 4 4 0 0%
src/bob/bio/base/wrappers.py wrap_checkpoint_extractor 5 0 0 100%
src/bob/bio/base/wrappers.py (no function) 12 0 0 100%
Total   4373 1195 0 73%

No items found using the specified filter.